<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">VeriXiv</journal-id>
            <journal-title-group>
                <journal-title>VeriXiv</journal-title>
            </journal-title-group>
            <issn pub-type="epub">3029-0988</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/verixiv.2188.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Research Article</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Evaluating the Effectiveness, Robustness, and Degree of Agreement Between Cattle Oestrus Detection Tools Under Tropical Conditions</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Muasa</surname>
                        <given-names>Bridgit S</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0009-0002-9256-821X</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Chagunda</surname>
                        <given-names>Mizeck</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Onyango</surname>
                        <given-names>Josh</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <uri content-type="orcid">https://orcid.org/0009-0005-3727-478X</uri>
                    <xref ref-type="aff" rid="a3">3</xref>
                </contrib>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Peters</surname>
                        <given-names>Andrew Raymond</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Funding Acquisition</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-4549-7095</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a4">4</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>State Department for Livestock, Ministry of Agriculture and Livestock Development, Nairobi, Kenya</aff>
                <aff id="a2">
                    <label>2</label>Centre for Tropical Livestock Genetics and Health, The University of Edinburgh College of Medicine and Veterinary Medicine, Edinburgh, Scotland, UK</aff>
                <aff id="a3">
                    <label>3</label>Harper Adams University, Edgemond, England, UK</aff>
                <aff id="a4">
                    <label>4</label>Arpexas (Scotland) Limited, Edinburgh, UK</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:apeters@arpexas.com">apeters@arpexas.com</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>28</day>
                <month>11</month>
                <year>2025</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2025</year>
            </pub-date>
            <volume>2</volume>
            <elocation-id>396</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>22</day>
                    <month>11</month>
                    <year>2025</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2025 Muasa BS et al.</copyright-statement>
                <copyright-year>2025</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://verixiv.org/articles/2-396/pdf"/>
            <abstract>
                <p>Effective oestrus detection is fundamental for optimizing reproductive efficiency in dairy farming, especially under smallholder systems in low- and middle-income countries (LMICs). This study aimed to evaluate the effectiveness, robustness, and degree of agreement between three oestrus detection tools (ODTs) &#x2013; P4 Rapid&#x2122;, Estrotect&#x2122;, and CowAlert
                    <sup>&#x00ae;</sup> under tropical field conditions. Fifty one cows of various breeds and parities at the University of Nairobi dairy farm were monitored using the three ODTs, with milk progesterone ELISA profiles serving as the reference standard. A total of 130 oestrus events were confirmed. P4 Rapid&#x2122; showed the highest sensitivity (98%) but the lowest specificity (51%), whereas Estrotect&#x2122; and CowAlert
                    <sup>&#x00ae;</sup> exhibited lower sensitivity (26% and 20% respectively), but high specificity (92%). Robustness was evaluated by integrating covariates such as parity, milk yield, body condition score, and days in milk, revealing that parity and stage of lactation significantly influenced tool performance. The economic cost of missed or false positive detections was also estimated, showing P4 Rapid&#x2122; as the most cost-effective option. The study concludes that ODTs vary in accuracy and robustness, and selecting the most suitable tool should be context specific, taking into account herd structure, environmental conditions, and economic trade-offs.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>oestrus detection</kwd>
                <kwd>smallholder dairy</kwd>
                <kwd>P4 Rapid</kwd>
                <kwd>CowAlert</kwd>
                <kwd>Estrotect</kwd>
                <kwd>Kenya</kwd>
                <kwd>progesterone</kwd>
                <kwd>tropical cattle</kwd>
            </kwd-group>
            <funding-group>
                <award-group id="fund-1" xlink:href="https://doi.org/10.13039/100000865">
                    <funding-source>Bill and Melinda Gates Foundation</funding-source>
                    <award-id>OPP1083453</award-id>
                </award-group>
                <funding-statement>The author(s) declared that no grants were involved in supporting this work.</funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec id="sec1" sec-type="intro">
            <title>Introduction</title>
            <p>Smallholder dairy farming constitutes the predominant form of livestock production in low- and middle-income countries (LMICs), contributing significantly to nutrition, household income, and livelihoods. However, productivity in these systems is hampered by several factors including poor reproductive efficiency, inadequate nutrition, infectious diseases, heat stress, and suboptimal management practices (
                <xref ref-type="bibr" rid="ref5">Bang 

                    <italic toggle="yes">et al.,
</italic> 2022</xref>; 
                <xref ref-type="bibr" rid="ref4">Banda 

                    <italic toggle="yes">et al.,
</italic> 2021</xref>). Effective reproductive management, particularly oestrus detection, is critical for improving reproductive indices such as pregnancy rate, heat detection rate, days open, and inseminations per conception (
                <xref ref-type="bibr" rid="ref12">Crowe 

                    <italic toggle="yes">et al.,
</italic> 2018</xref>; 
                <xref ref-type="bibr" rid="ref16">Endo 2022</xref>).</p>
            <p>In many LMIC settings, oestrus detection is based on visual observation. This approach often fails due to farmers&#x2019; limited capacity to detect signs of oestrus accurately, resulting in delayed or missed inseminations (
                <xref ref-type="bibr" rid="ref2">Alawneh 

                    <italic toggle="yes">et al.,
</italic> 2006</xref>; 
                <xref ref-type="bibr" rid="ref1">Adenuga 

                    <italic toggle="yes">et al.,
</italic> 2020</xref>). Oestrus expression is modulated by physiological variables such as parity and milk yield, and environmental stressors like heat and mobility (
                <xref ref-type="bibr" rid="ref31">Wrzeci&#x0144;ska 

                    <italic toggle="yes">et al.,
</italic> 2021</xref>; 
                <xref ref-type="bibr" rid="ref27">Szalai 

                    <italic toggle="yes">et al.,
</italic> 2025</xref>). For example, lameness and negative energy balance are known to reduce the intensity of oestrus behaviours, such as increased locomotion or standing heat (
                <xref ref-type="bibr" rid="ref11">Cook 

                    <italic toggle="yes">et al.,
</italic> 2007</xref>; 
                <xref ref-type="bibr" rid="ref30">Walker 

                    <italic toggle="yes">et al.,
</italic> 2008</xref>; 
                <xref ref-type="bibr" rid="ref14">Das 

                    <italic toggle="yes">et al.,
</italic> 2016</xref>; 
                <xref ref-type="bibr" rid="ref26">Polsky &amp; Von Keyserlingk, 2017</xref>).</p>
            <p>Oestrus detection tools (ODTs) have been developed to automate or assist with detection based on physiological or behavioral markers. These tools function as screening tests, rather than diagnostic tools, because they predict the likelihood of a cow being in oestrus without providing definitive confirmation (
                <xref ref-type="bibr" rid="ref17">Firk 

                    <italic toggle="yes">et al.,
</italic> 2002</xref>; 
                <xref ref-type="bibr" rid="ref10">Chung 

                    <italic toggle="yes">et al.,
</italic> 2013</xref>; 
                <xref ref-type="bibr" rid="ref1">Adenuga 

                    <italic toggle="yes">et al.,
</italic> 2020</xref>). Performance evaluation of ODTs, therefore, hinges on sensitivity (ability to identify true positives), specificity (ability to rule out non-oestrus), and robustness under diverse management systems (
                <xref ref-type="bibr" rid="ref7">Cavalieri 

                    <italic toggle="yes">et al.,
</italic> 2003</xref>; 
                <xref ref-type="bibr" rid="ref6">Brassel 

                    <italic toggle="yes">et al.,
</italic> 2018</xref>).</p>
            <p>This study was the second of three sequential experiments, conducted separately and under varied experimental and field conditions, but designed in a progressive way (part of PhD project 
                <xref ref-type="bibr" rid="ref24">Muasa B., 2020</xref>) and aimed to assess the agreement, effectiveness, and robustness of three ODTs &#x2013; CowAlert
                <sup>&#x00ae;</sup> (activity monitor), Estrotect&#x2122; (scratch card), and P4 Rapid&#x2122; (progesterone test) under the tropical conditions of a smallholder dairy system in Kenya. Specific objectives were: (1) to determine the agreement among ODTs, (2) to evaluate their sensitivity and specificity in detecting true oestrus events, and (3) to explore how intrinsic factors like parity, milk yield, body weight, and days in milk influence their effectiveness.</p>
        </sec>
        <sec id="sec2">
            <title>Materials and methods</title>
            <sec id="sec3">
                <title>Ethical approval and consent</title>
                <p>At the time these experiments were carried out, the University of Nairobi did not have a formal Ethics Committee. However, approval and verbal consent were given by the Clinical Studies Department of the University of Nairobi veterinary school, represented by Professor Henry Mutembei. The study was approved by SRUC&#x2019;s Animal Experiments Committee (submission number: ED AE 17-2016).</p>
            </sec>
            <sec id="sec4">
                <title>Study site</title>
                <p>The study was conducted at the University of Nairobi (UoN) dairy farm in Kenya. Data were collected in two distinct sampling periods: from 29th March 2017 to 21st August 2017 (Part 1) and from 13th December 2017 to 20th June 2018 (Part 2). The farm practices smallholder-style management with a herd of approximately 80 lactating cows of mixed breeds, including Ayrshire, Friesian, Guernsey, Jersey, and their crosses.</p>
            </sec>
            <sec id="sec5">
                <title>Sampling criteria</title>
                <p>Nulliparous and pregnant cows at the start of sampling were excluded. In Part 1, cows were enrolled at seven days postpartum or the nearest test day. However, due to a foot-and-mouth disease (FMD) outbreak and time constraints, Part 2 included all open and lactating cows regardless of postpartum stage. All cows were examined by veterinarians to exclude those with obvious health conditions. Nonetheless, animals previously affected by FMD were included, as more than 80% of the herd had been infected.</p>
            </sec>
            <sec id="sec6">
                <title>Animal management</title>
                <p>The cows were grazed daily and housed in open-sided shelters at night. They received supplemental silage and dairy meal during milking, which was done twice daily in a herringbone parlour. Body weights were recorded weekly, and body condition scores (BCS) and locomotion scores (LCS) were assessed by trained staff using standard protocols.</p>
            </sec>
            <sec id="sec7">
                <title>Milk sample collection and progesterone assay</title>
                <p>Milk sampling began on day 7 postpartum for Part 1 and included all open cows in Part 2. Samples were collected on Mondays, Wednesdays, and Fridays. Collection continued until pregnancy was confirmed (by ultrasound between 30 and 40 days post-insemination) or the study ended. Progesterone levels were measured using an ELISA kit (M-plate, Ridgeway Science, UK), and results were read with a BioTek reader and Gen5&#x2122; software. The intra-assay and inter-assay coefficients of variation were less than 15% and 18%, respectively.</p>
            </sec>
            <sec id="sec8">
                <title>Oestrus detection tools</title>
                <p>Three tools were assessed:
                    <list list-type="order">
                        <list-item>
                            <label>1.</label>
                            <p>CowAlert
                                <sup>&#x00ae;</sup> (IceRobotics, UK): A leg-mounted accelerometer providing real-time activity monitoring. Data were collected every 15 minutes and analy
                                <bold>s</bold>ed using proprietary software. Alerts in the first 7 days post-attachment were excluded.</p>
                        </list-item>
                        <list-item>
                            <label>2.</label>
                            <p>Estrotect&#x2122; (Rockway Inc, USA): A scratchcard-type heat detector placed on the tail head. Patches were observed visually, and a cow was classified as in oestrus when &#x2265;50% of the surface was rubbed off.</p>
                        </list-item>
                        <list-item>
                            <label>3.</label>
                            <p>P4 Rapid&#x2122; (Ridgeway Science, UK): A lateral flow assay to semi-quantitatively determine progesterone concentrations in milk. Results were categori
                                <bold>s</bold>ed based on color intensity and compared with standard interpretations.</p>
                        </list-item>
                    </list>
                </p>
            </sec>
            <sec id="sec9">
                <title>Data management and statistical analysis</title>
                <p>Data were handled in Microsoft Excel and analyzed using R (version 3.3&#x2013;3.6). Progesterone profiles were smoothed using the LOESS method to model temporal fluctuations in hormone levels. An oestrus event was defined as two consecutive test days with progesterone &#x2264;2.0 ng/ml followed by a reading &gt;2.0 ng/ml. A total of 210 such events were identified.</p>
                <p>Cochran&#x2019;s Q test was applied to compare detection frequencies across tools. Post-hoc paired McNemar&#x2019;s tests with Bonferroni correction identified specific group differences. Generalized Estimating Equations (GEE) were used to model the odds of true oestrus, accounting for repeated measures within cows. Predictors included parity, milk yield, body weight, days in milk (DIM), BCS, and LCS. A significance threshold of p &lt; 0.05 was adopted.</p>
            </sec>
        </sec>
        <sec id="sec10" sec-type="results">
            <title>Results</title>
            <sec id="sec11">
                <title>Progesterone evaluation</title>
                <p>Out of a total of 2,411 milk samples collected during the study period, 345 samples exhibited near-zero progesterone concentrations. The minimum concentration was 0.2 ng/ml, with a median of 1.6 ng/ml, and a mean and maximum of 4.5 ng/ml and 34.64 ng/ml, respectively. The intra-assay and inter-assay coefficients of variation were &lt;15% and &lt;18%, respectively, indicating acceptable assay reliability.</p>
            </sec>
            <sec id="sec12">
                <title>Milk yield, body condition, and locomotion scores</title>
                <p>A total of 2,384 milk yield entries were recorded, with 27 missing data points. The average daily milk yield across all parities was 9.0 litres, ranging from 1.0 to 23.0 litres.</p>
                <p>Body Condition Scores (BCS) ranged from 1.0 to 3.0 with a median of 3.0. Locomotion Scores (LCS) ranged from 1.0 to 4.0 with a median of 2.0.</p>
                <p>Cow weights varied by breed classification, with recorded minimum, median, and maximum values of 233 kg, 416 kg, and 591 kg, respectively, for breed-classified tape; and 242 kg, 426 kg, and 645 kg, respectively, for unclassified breeds.</p>
            </sec>
            <sec id="sec13">
                <title>Oestrus cycling and events</title>
                <p>Of the 51 cows enrolled in the second sampling phase, 48 were identified as cycling (
                    <xref ref-type="table" rid="T1">
Table 1</xref>). A total of 130 oestrus events were documented using the progesterone-based reference standard. Two cows from parities 5 and 6 were excluded due to incomplete data, and one cow from parity 7 did not exhibit any oestrus.</p>
                <table-wrap id="T1" orientation="portrait" position="float">
                    <label>
Table 1. </label>
                    <caption>
                        <title>Number of cows by parity and cycling status.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Parity</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">No. of cows recruited</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
No. of cows cycling</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">6</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">6</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">4</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">5</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">8</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">6</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">8</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">7</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">8</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Total</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">51</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">48</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
                <p>The 130 oestrus events were distributed across parity groups, with the highest average number of events observed in third-parity cows (mean = 4.2 events). The average number of oestrus events per cow was 3.1, with a range from 1 to 9 events (
                    <xref ref-type="table" rid="T2">
Table 2</xref>).</p>
                <table-wrap id="T2" orientation="portrait" position="float">
                    <label>
Table 2. </label>
                    <caption>
                        <title>Number of oestrus events and central tendency by parity.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top"/>
                                <th align="left" colspan="1" rowspan="1" valign="top"/>
                                <th align="left" colspan="4" rowspan="1" valign="top">Oestrus events</th>
                            </tr>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Parity</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">No of cows</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">No of events</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Mean</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Minimum</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
Maximum</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">23</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2.5</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">8</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">6</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">20</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3.3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">6</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">38</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4.2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">4</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">5</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">8</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2.6</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">7</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">6</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">8</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">19</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2.3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">7</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">8</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.5</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>Total</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>46</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>130</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>3.1</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>1</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">
                                    <bold>9</bold>
</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
                <p>The mean, median, minimum and maximum lengths of the cycle were 23.9, 23, 9 and 82.0 days respectively.</p>
            </sec>
            <sec id="sec14">
                <title>Oestrus cycle length</title>
                <p>The mean, median, minimum, and maximum lengths of oestrus cycles were 23.9, 23, 9, and 82 days, respectively (
                    <xref ref-type="table" rid="T3">
Table 3</xref>). A total of 20% of cycles ranged from 9&#x2013;16 days, 38% ranged from 17&#x2013;28 days, and 39% exceeded 30 days.</p>
                <table-wrap id="T3" orientation="portrait" position="float">
                    <label>
Table 3. </label>
                    <caption>
                        <title>Oestrus cycle length by parity.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top"/>
                                <th align="left" colspan="4" rowspan="1" valign="top">oestrus cycle length</th>
                            </tr>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Parity</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Mean</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Minimum</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Median</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
Maximum</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21.7</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">17</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">63</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">2</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">27.8</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">14</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">23</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">70</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">24.7</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">26</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">74</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">4</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">5</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">31.38</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">82</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">6</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">33.11</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">9</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">42</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">67</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">7</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">21</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">8</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">11</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">11</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">11</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">11</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
            </sec>
            <sec id="sec15">
                <title>Degree of agreement between ODTs</title>
                <p>P4 Rapid&#x2122; recorded the highest proportion of positive oestrus alerts (54%), followed by Estrotect&#x2122; (9.9%) and CowAlert
                    <sup>&#x00ae;</sup> (9.2%). Statistical analysis using Cochran&#x2019;s Q test revealed significant differences in detection ability among the three ODTs (&#x03c7;
                    <sup>2</sup> = 1078.65, df = 2, n = 4848, p &lt; 0.001) (
                    <xref ref-type="fig" rid="f1">
Figure 1</xref>). Post-hoc McNemar&#x2019;s tests showed significant differences in pairwise comparisons between CowAlert
                    <sup>&#x00ae;</sup> and P4 Rapid&#x2122;, and between Estrotect&#x2122; and P4 Rapid&#x2122; (p &lt; 0.001) (
                    <xref ref-type="table" rid="T4">
Table 4</xref>).</p>
                <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                    <label>
Figure 1. </label>
                    <caption>
                        <title>Frequency of oestrus detection by each ODT.</title>
                        <p>True denotes an oestrus event, while false is a non-oestrus event.</p>
                    </caption>
                    <graphic id="gr1" orientation="portrait" position="float" xlink:href="https://verixiv-files.f1000.com/manuscripts/2255/ba91b0a5-5c38-4bfb-8cdc-d06a344bfe58_figure1.gif"/>
                </fig>
                <table-wrap id="T4" orientation="portrait" position="float">
                    <label>
Table 4. </label>
                    <caption>
                        <title>McNemar&#x2019;s test results for pairwise comparisons.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Comparison</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">chi.sq</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">DF</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">P (unadjusted)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
P (adjusted)
                                    <xref ref-type="table-fn" rid="tfn1">*</xref>
                                </th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">CowAlert - Estrotect</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.54</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.462</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">CowAlert - P4rapid</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">618</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001
                                    <xref ref-type="table-fn" rid="tfn2">**</xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001
                                    <xref ref-type="table-fn" rid="tfn2">**</xref>
                                </td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Estrotect - P4rapid</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">642</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001
                                    <xref ref-type="table-fn" rid="tfn2">**</xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001
                                    <xref ref-type="table-fn" rid="tfn2">**</xref>
                                </td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <p>DF, Degree of freedom.</p>
                        <fn-group content-type="footnotes">
                            <fn id="tfn1">
                                <label>*</label>
                                <p>p-values adjusted with the Bonferroni method.</p>
                            </fn>
                            <fn id="tfn2">
                                <label>**</label>
                                <p>P &lt; 0.001.</p>
                            </fn>
                        </fn-group>
                    </table-wrap-foot>
                </table-wrap>
            </sec>
            <sec id="sec16">
                <title>Effectiveness of ODTs in predicting true oestrus</title>
                <p>
                    <xref ref-type="table" rid="T5">
Table 5</xref> shows that all three ODTs demonstrated statistically significant predictive value for true oestrus events (p &lt; 0.001). P4 Rapid&#x2122; had the highest odds ratio (OR = 65.75), indicating superior effectiveness compared to CowAlert
                    <sup>&#x00ae;</sup> (OR = 2.7) and Estrotect&#x2122; (OR = 3.82).</p>
                <table-wrap id="T5" orientation="portrait" position="float">
                    <label>
Table 5. </label>
                    <caption>
                        <title>Odds ratios for predicting true oestrus events.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Test</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Estimate</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">OR (95% CI)</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">SE</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
P-value
</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">P4 Rapid&#x2122;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">4.19</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">65.75 (16.21, 266.70)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.71</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">CowAlert
                                    <sup>&#x00ae;</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.99</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">2.70 (1.67, 4.38)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.25</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Estrotect&#x2122;</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">1.3</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">3.82 (2.48, 5.88)</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.22</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">&lt;0.001</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
            </sec>
            <sec id="sec17">
                <title>Diagnostic performance: sensitivity and specificity</title>
                <p>P4 Rapid&#x2122; exhibited the highest sensitivity at 98%, but its specificity was relatively low at 51% (
                    <xref ref-type="table" rid="T6">
Table 6</xref>). CowAlert
                    <sup>&#x00ae;</sup> and Estrotect&#x2122; showed lower sensitivity (20% and 26%, respectively) but high specificity (92% each).</p>
                <table-wrap id="T6" orientation="portrait" position="float">
                    <label>
Table 6. </label>
                    <caption>
                        <title>Sensitivity and specificity with and without covariate adjustment.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1" valign="top">Diagnostic test</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">Measure</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">No covariates</th>
                                <th align="left" colspan="1" rowspan="1" valign="top">
Covariates included</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">P4 Rapid
                                    <bold>&#x2122;</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Sensitivity</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.98 (0.94, 1.0)
                                    <sup>a</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.97 (0.01, 1.0)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">CowAlert&#x00c2;
                                    <sup>&#x00ae;</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Sensitivity</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.20 (0.14, 0.28)
                                    <sup>b</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.06 (0.001, 0.91)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Estrotect
                                    <bold>&#x2122;</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Sensitivity</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.26 (0.19, 0.34)
                                    <sup>b</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.30 (0.013, 0.95)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">P4 Rapid
                                    <bold>&#x2122;</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Specificity</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.51 (0.48, 0.53)
                                    <sup>a</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.21 (0.087, 0.42)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">Estrotect
                                    <bold>&#x2122;</bold>
</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Specificity</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.92 (0.90, 0.93)
                                    <sup>b</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.88 (0.54, 0.98)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1" valign="top">CowAlert&#x00c2;
                                    <sup>&#x00ae;</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">Specificity</td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.92 (0.90, 0.93)
                                    <sup>b</sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1" valign="top">0.58 (0.19, 0.89)</td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <p>Columns with the same superscript are not significantly different.</p>
                    </table-wrap-foot>
                </table-wrap>
                <p>When adjusted for covariates such as parity, body weight, days in milk, and BCS, P4 Rapid&#x2122; maintained a high sensitivity (97%) but a decreased specificity (21%). CowAlert
                    <sup>&#x00ae;</sup> and Estrotect&#x2122; showed variable sensitivity and specificity, with CowAlert
                    <sup>&#x00ae;</sup> most affected by covariate adjustment.</p>
            </sec>
            <sec id="sec18">
                <title>Effect of cow-level factors on ODT performance</title>
                <p>Cow-level factors such as parity, days in milk (DIM), BCS, and milk yield significantly influenced the sensitivity and specificity of the ODTs (
                    <xref ref-type="fig" rid="f2">
Figure 2</xref>). Sensitivity of P4 Rapid&#x2122; remained robust across all variables, while CowAlert
                    <sup>&#x00ae;</sup> and Estrotect&#x2122; showed varying sensitivities. Significant differences were observed particularly for cows within 60 DIM and in higher parity classes.</p>
                <fig fig-type="figure" id="f2" orientation="portrait" position="float">
                    <label>
Figure 2. </label>
                    <caption>
                        <title>Diagnostic performance of ODTs stratified by covariates.</title>
                    </caption>
                    <graphic id="gr2" orientation="portrait" position="float" xlink:href="https://verixiv-files.f1000.com/manuscripts/2255/ba91b0a5-5c38-4bfb-8cdc-d06a344bfe58_figure2.gif"/>
                </fig>
            </sec>
        </sec>
        <sec id="sec19" sec-type="discussion">
            <title>Discussion</title>
            <p>This represents the first study, to our knowledge, from a low- and middle-income country aimed at assessing the level of agreement among oestrus detection tools, evaluating their effectiveness, and identifying factors that may influence their performance. Notably, prior infection with FMD emerged as a potential confounding variable, possibly affecting cow performance in subtle or unrecognised ways during the study. Previous research has indicated that FMD can impair reproductive function in cattle (
                <xref ref-type="bibr" rid="ref9">Chaters 

                    <italic toggle="yes">et al.,
</italic> 2018</xref>).</p>
            <p>A total of 130 oestrus events were identified in 51 cows using a temporal progesterone profiling approach. Notably, only 38% of the recorded oestrous cycles fell within the 17 to 28-day range, which deviates from the typical cycle length of 18 to 24 days as described by 
                <xref ref-type="bibr" rid="ref18">Forde 
                    <italic toggle="yes">et al.</italic> (2011)</xref>. This apparent prolongation of cycle length may be attributed to undetected oestrus events by the progesterone-based method, resulting in an overestimation of cycle duration. However, other studies utilizing sensor-based technologies have reported oestrous cycle lengths ranging from 15 to 26 days (
                <xref ref-type="bibr" rid="ref13">Cushman 

                    <italic toggle="yes">et al.,
</italic> 2024</xref>).</p>
            <p>The results on agreement between the oestrus detection tools (ODTs) revealed statistically significant differences in the detection outcomes when P4 Rapid&#x2122; was compared with CowAlert
                <sup>&#x00ae;</sup> and Estrotect&#x2122;, indicating poor concordance between P4 Rapid&#x2122; and the other two tools. This suggests that the tools do not consistently identify the same oestrus events, likely due to their reliance on different physiological or behavioral indicators. Supporting this observation, 
                <xref ref-type="bibr" rid="ref20">Holman 
                    <italic toggle="yes">et al.</italic> (2011)</xref> reported that scratch cards had markedly lower sensitivity (36%) for detecting true oestrus compared to activity meters, neck collars, and visual observation, all of which showed sensitivities of approximately 60%. These findings align with the expectation that ODTs designed to measure distinct signs or predictors of oestrus vary in performance depending on their robustness and the predictive value of the indicator being measured. Oestrus signs may be classified as primary, such as the classic &#x2018;standing to be mounted&#x2019; behavior, or secondary, including increased restlessness, mounting other cows, clear mucous discharge, dirty flanks, vulvar swelling and redness, as well as reduced feed intake and milk yield. Various ODTs target the primary sign of standing oestrus, such as tail paint, pressure-sensitive devices, and electronic mount detectors. In contrast, activity-based indicators reflect secondary signs, which are more susceptible to external factors like herd dynamics, housing systems, and environmental or management conditions.</p>
            <p>The effectiveness of the three ODTs was assessed, with P4 Rapid demonstrating the highest sensitivity at 98% and a specificity of 51%. This high sensitivity aligns with findings by 
                <xref ref-type="bibr" rid="ref21">Ingenhoff 
                    <italic toggle="yes">et al.</italic> (2016)</xref>, who reported a sensitivity of 90.1%, and 
                <xref ref-type="bibr" rid="ref29">Waldmann and Raud (2016)</xref>, who found a sensitivity of 95%. In commercial dairy operations, where maximizing the identification of cows is likely in oestrus is critical, tools with high sensitivity are particularly valuable. While specificity which is correctly identifying non-oestrus events is less of a priority in such settings, the performance of P4 Rapid indicates it is the most advantageous tool under these conditions.</p>
            <p>The reliability of CowAlert
                <sup>&#x00ae;</sup> as an ODT was compromised by recurrent system instability in this production setting. Over the 18-month study period, 11 outages were recorded, each lasting between 8 and 120 hours, with an average duration of less than 48 hours. These disruptions often triggered false heat alerts, with a notable instance where a 120-hour outage led to 48 cows being incorrectly flagged as in oestrus. To mitigate this, all oestrus events detected within and up to 24 hours after an outage were excluded from the analysis, thereby reducing the dependability of CowAlert
                <sup>&#x00ae;</sup> for accurate heat detection.</p>
            <p>In this study, cows spent most of the day grazing in open fields, averaging approximately 5,104 steps per day. Given an average pasture stride length of 1.5 meters (
                <xref ref-type="bibr" rid="ref3">Alsaaod 

                    <italic toggle="yes">et al.,
</italic> 2017</xref>), this translates to an estimated distance of about 7.6 km per day. Oestrus behaviours tend to be less evident in grazing cows than in those kept indoors (
                <xref ref-type="bibr" rid="ref25">Palmer 

                    <italic toggle="yes">et al.,
</italic> 2012</xref>). The CowAlert
                <sup>&#x00ae;</sup> system uses algorithms that compute a rolling average of activity, often based on the previous 24 hours. For example, 
                <xref ref-type="bibr" rid="ref23">McGowan 
                    <italic toggle="yes">et al.</italic> (2007)</xref> analysed a 24-hour moving average and calculated its rate of change using regression on the prior 10-hour (Activity 24/10) or 5-hour (Activity 24/5) windows. It is assumed that the algorithms in the current study operate on similar principles, detecting oestrus based on deviations from a presumed stable baseline activity. However, this method is more effective when cow movement is confined, such as in barns or paddocks. In contrast, the varying grazing distances in this study determined by herdsmen likely disrupted the stability of the rolling mean, reducing the system&#x2019;s sensitivity. This may explain the notably low CowAlert
                <sup>&#x00ae;</sup> sensitivity of 20% observed here, compared to sensitivities of up to 80% reported by 
                <xref ref-type="bibr" rid="ref15">Dolecheck 
                    <italic toggle="yes">et al.</italic> (2015)</xref> and 84% by 
                <xref ref-type="bibr" rid="ref23">McGowan 
                    <italic toggle="yes">et al.</italic> (2007)</xref>.</p>
            <p>The sensitivity of Estrotect&#x2122; heat detectors was 26%, closely aligning with that of CowAlert&#x2122;. Given that the cows were primarily managed under grazing conditions, the Estrotect&#x2122; patches were more susceptible to environmental wear, which likely compromised their functionality. Prolonged exposure to elements such as mud, dung, and mechanical abrasion resulted in the patches being observed as dirty, torn, partially detached, or faded factors that may have interfered with accurate assessment of activation. Additionally, the adhesive site of the patches appeared to serve as a refuge for ticks, which prefer warm, moist body regions. Notably, the effectiveness of Estrotect&#x2122; varies across studies: 
                <xref ref-type="bibr" rid="ref22">Johnson and Jaeger (2016)</xref> reported a sensitivity of 79% in prepubertal heifers, while 
                <xref ref-type="bibr" rid="ref28">van den Berg (2014)</xref> found a sensitivity ranging from 34% to 56% when Estrotect
                <sup>&#x00ae;</sup> was used in combination with other oestrus detection methods.</p>
            <p>Parity and stage of lactation (days in milk, DIM) emerged as the two key factors significantly influencing the performance of oestrus detection tools (ODTs). Parity, which reflects both the age and physiological maturity of the cow, has been associated with increased oestrus intensity. Previous studies have demonstrated that the number of mounts per hour rises from approximately 5.5 in nulliparous heifers to 7.9 in cows beyond their fourth parity, indicating that oestrus expression tends to intensify with successive lactations possibly due to behavioural conditioning from earlier oestrus cycles (
                <xref ref-type="bibr" rid="ref19">Gwazdauskas et al., 1983</xref>). Based on this, it would be reasonable to expect that the sensitivity of Estrotect&#x2122; would improve with advancing parity. However, findings from the present study contradict this assumption, as Estrotect&#x2122; sensitivity actually declined progressively with higher parity, showing the lowest mean sensitivity in cows of 5th to 9th parity. An alternative explanation considers the role of increased body weight and social dominance in older cows, which may disrupt the dynamics of sexually active groups. Supporting this view, earlier research has shown that over 60% of mounting behaviour is initiated by dominant cows in higher social hierarchies suggesting that such cows are more likely to initiate mounting rather than being mounted themselves.</p>
            <p>For CowAlert
                <sup>&#x00ae;</sup>, the trend in sensitivity across parities was less consistent, although cows in the fourth parity exhibited the lowest mean sensitivity. Overall, a declining trend in mean sensitivity with increasing parity was observed, aligning with earlier findings that oestrus-related walking activity diminishes as the number of lactations increases, and that oestrus is more prominently expressed in cows of lower parity. A study conducted in France on Holstein cows similarly reported a significant parity effect, where first-parity cows had higher oestrus detection sensitivity using activity meters compared to those in their third parity (
                <xref ref-type="bibr" rid="ref8">Chanvallon et al., 2014</xref>). In contrast, P4 Rapid&#x2122; appeared minimally affected by parity, as its mean sensitivity remained relatively stable across different parities.</p>
            <p>A statistically significant difference was observed across stages of lactation, with the most notable variation in sensitivity of the three oestrus detection tools occurring in cows sampled within the first 60 days in milk. In contrast, the French study reported an increase in oestrus detection sensitivity as lactation progressed.</p>
            <p>Inadequate or failed oestrus detection, which delays conception, imposes a measurable financial burden. No clear studies showing the cost of missed oestrus events in this production system were found in the literature. Therefore, the study used the values estimated by Esslemont et al., 20001, for UK farms for average producing cows. Their model estimated cost of delayed conception ranges from &#x00a3;1.73 to &#x00a3;3.55 per cow per day for average-yielding cows failing to conceive between 85&#x2013;100 days and 146&#x2013;175 days postpartum, respectively. Since oestrus detection tools (ODTs) serve as screening tests, their results influence whether a cow is presented for artificial insemination (AI). In AI-based dairy systems, accurately identifying cows in oestrus is essential to optimize reproductive efficiency. Failure to detect oestrus means the cow is not inseminated during that cycle, incurring a loss of &#x00a3;56 per cow per missed 21-day cycle. Conversely, correctly identifying non-oestrus cows conserves labour and breeding resources, estimated at approximately &#x00a3;10 per instance.</p>
            <p>Based on each ODT&#x2019;s sensitivity, the cost of missed heats was simulated in a hypothetical 100-cow herd. Among the tools, P4 Rapid incurred the lowest cost (&#x00a3;150), while Estrotect&#x2122; resulted in the highest (&#x00a3;5,550). Similarly, false positives driven by lower specificity were simulated, with P4 Rapid showing the highest cost (&#x00a3;196) and Astrotech&#x2122; the lowest (&#x00a3;32).</p>
            <p>Overall, the total combined cost of missed and false oestrus detections per cycle ranged from &#x00a3;150 to &#x00a3;5,550 per 100 cows. Thus, P4 Rapid proved to be the most economically advantageous per cycle per 100 cows compared to the other tools.</p>
        </sec>
        <sec id="sec20" sec-type="conclusion">
            <title>Conclusion</title>
            <p>This study evaluated the effectiveness, robustness, and degree of agreement among three oestrus detection tools &#x2013; P4 Rapid&#x2122;, Estrotect&#x2122;, and CowAlert
                <sup>&#x00ae;</sup> under tropical smallholder dairy conditions in Kenya. Using a progesterone-based reference standard, the study identified 130 oestrus events across 51 lactating cows and assessed each tool&#x2019;s diagnostic performance and influencing intrinsic factors. P4 Rapid&#x2122; demonstrated superior sensitivity and predictive value for detecting true oestrus events, making it the most effective tool among the three. Estrotect&#x2122; and CowAlert
                <sup>&#x00ae;</sup> exhibited lower sensitivity but maintained high specificity, which may be beneficial in minimizing false positives. The performance of CowAlert
                <sup>&#x00ae;</sup> was significantly influenced by management system constraints, such as grazing distance and environmental variability, while Estrotect&#x2122;&#x2019;s durability was compromised by field exposure to dirt, moisture, and physical abrasion. P4 Rapid&#x2122;&#x2019;s performance remained relatively stable across different cow-level factors. Cow-level factors such as parity, days in milk, body condition, and locomotion scores significantly influenced tool sensitivity and specificity. Among these, parity and stage of lactation appeared most critical, particularly affecting Estrotect&#x2122; and CowAlert
                <sup>&#x00ae;</sup> performance. Economically, the use of P4 Rapid&#x2122; resulted in the lowest combined cost of missed and false oestrus events per cycle. Therefore, in resource-limited and grazing-based systems, P4 Rapid&#x2122; presents a more viable oestrus detection strategy despite its lower specificity. Overall, this study highlights the need to match oestrus detection technologies with farm-specific conditions and cow-level variables to improve reproductive efficiency and economic returns in smallholder dairy systems. Further research may explore integration or combination of multiple detection strategies to enhance accuracy under field conditions.</p>
            <sec id="sec21">
                <title>Animal ethics statement</title>
                <p>At the time these experiments were carried out, the University of Nairobi did not have a formal Ethics Committee. However, approval and verbal consent were given by the Clinical Studies Department of the University of Nairobi veterinary school, represented by Professor Henry Mutembei. The study was approved by SRUC&#x2019;s Animal Experiments Committee (submission number: ED AE 17-2016).</p>
            </sec>
        </sec>
    </body>
    <back>
        <sec id="sec25" sec-type="data-availability">
            <title>Data availability</title>
            <p>Data cannot be shared at this time.</p>
        </sec>
        <ack>
            <title>Acknowledgements</title>
            <p>The authors wish to thank Dr. C. Ashworth and Professor R. Dewhurst for assistance with the project at various times.</p>
        </ack>
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